Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889654.1_cds_XP_016444357.1_39427
CDS Infomation

[gene=LOC107769637] [db_xref=GeneID:107769637] [protein=endoglucanase 1-like] [protein_id=XP_016444357.1] [location=complement(join(28836..29326,29577..29688,29786..29947,30182..30274,30352..30774,30876..31094))] [gbkey=CDS]
Sequence

ATGGCCCATCCTATAAACATGCTGATTTTATGCTTCACCTTCTTCCTCTTACTTAACCTT
TCTCATAATTTTGCCTTTGCTTTCACTTCTCAAGATTACTCTGTTGCTCTTGAGAAATCA
ATTCGCTTTTTTGAGGGACAGAGGTCGGGAAAGCTGCCTGCAAATCAACGCCTTAAATGG
AGGGGTGATTCTGGCTTGTCCGATGGTTCCGGTTACCATGTTGACCTAGTAGGAGGATAT
TATGATGCAGGGGACAATATTAAGTTTGGGCTGCCGATGGCATTTACAACAACTCTACTA
GCATGGAGTGTAATCGAATTTGGAAATTCCATGCACGGCCAACTTGAAAATGCTAAAGAA
GCGATTCGTTGGAGTACTGATTATCTTCTTAAAGCAGCTACAGCGAGCCCCAACACGCTA
TACGTGCAAGTAGGAGATCCAAACGAAGATCACAAGTGTTGGGAAAGACCTGAGGATATG
GACACACCGCGCAATGTGTACAAAGTATCGCCACAAAATCCAGGTTCTGATGTTGCAGCT
GAAACTGCTGCTGCTTTGGCTGCTGCCTCTATTGTGTTCAAAGATTCTGATCCTTCTTAT
TCTTCTAAATTATTGCATACTGCACAACAGCTAACTAGCATTGTGTTTGATTTTGCGGAC
AGGTATAGAGGTTCTTATAGTGATAGTCTCAGCTCAGTGGTCTGCCCATTTTATTGCTCT
TACTCTGGATACCATGATGAACTTTTGTGGGGAGCATCATGGCTTCATAGAGCTTCACAA
GATGCTTCCTATCTTGCTTATATTCAATCAAATGGCCAAACTTTGGGAGCTACTGAAGAT
GATTATTCCTTCAGTTGGGATGACAAGAGACCTGGAACCAAAATTGTCCTCTCAAAGGAC
TTCTTGGAAAAGAGTACTCAAGAATTCCAAGCATACAAAGTTCACTCAGACAACTATATC
TGCTCTTTAATTCCAGGTTCACCTAGCTTTCAAGCTCAGTATACCCCAGGGGGGCTTCTA
TTTAAAGGAAGTGCAAGCAATCTCCAATACGTAACATCATCATCATTTCTCCTATTAACC
TATGCCAAATACTTGAAGACAAATGGAGGAGCTGTCTCATGTGGAGCTTCAAGATATCCG
GCAGAGAAGCTAGTTGAACTCGCAAAAAAACAAGTAGACTACATATTAGGAGATAATCCA
GCAAGAATATCGTACATGGTTGGTTTCGGACAGAGGTATCCGCTACGTGTGCACCATAGA
GGTTCATCTCTACCTTCAGTGCATACACATCCTGGTCACATTGGCTGCAACGACGGATTC
CAGTCTTTGAACTCGGGCTCGCCTAATCCAAACATTCTTGTCGGAGCCATCGTAGGTGGT
CCTGACAGTAAAGATAACTTCGAAGACGACAGGAATAATTATGAGCAATCAGAGCCTGCT
ACATATATTAATGCACCACTAGTTGGAGCTCTTGCTTTCTTATCTGCAGAATCTATCTAA

Peptide Sequence

PEP ID

XP_016444357.1
PEP Infomation

PREDICTED: endoglucanase 1-like [Nicotiana tabacum]
Sequence

MAHPINMLILCFTFFLLLNLSHNFAFAFTSQDYSVALEKSIRFFEGQRSGKLPANQRLKW
RGDSGLSDGSGYHVDLVGGYYDAGDNIKFGLPMAFTTTLLAWSVIEFGNSMHGQLENAKE
AIRWSTDYLLKAATASPNTLYVQVGDPNEDHKCWERPEDMDTPRNVYKVSPQNPGSDVAA
ETAAALAAASIVFKDSDPSYSSKLLHTAQQLTSIVFDFADRYRGSYSDSLSSVVCPFYCS
YSGYHDELLWGASWLHRASQDASYLAYIQSNGQTLGATEDDYSFSWDDKRPGTKIVLSKD
FLEKSTQEFQAYKVHSDNYICSLIPGSPSFQAQYTPGGLLFKGSASNLQYVTSSSFLLLT
YAKYLKTNGGAVSCGASRYPAEKLVELAKKQVDYILGDNPARISYMVGFGQRYPLRVHHR
GSSLPSVHTHPGHIGCNDGFQSLNSGSPNPNILVGAIVGGPDSKDNFEDDRNNYEQSEPA
TYINAPLVGALAFLSAESI

Transcript Sequence

Gene sequence data has not been registered.